Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron (metal) dependent repressor, dtxr family | SAMN02910353_00679 | Not Available | + | 761712 - 762098 | 14491.6 |
| cellobiose phosphorylase | SAMN02910353_00680 | Not Available | - | 762355 - 764841 | 93051.0 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN02910353_00681 | Not Available | + | 765166 - 765972 | 30031.5 |
| peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family | SAMN02910353_00682 | Not Available | + | 766161 - 767690 | 55333.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN02910353_00683 | Not Available | + | 767771 - 769072 | 46375.4 |
| uncharacterized membrane protein yfho | SAMN02910353_00684 | Not Available | + | 769274 - 772708 | 128961.0 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN02910353_00685 | Not Available | + | 773020 - 774003 | 35205.2 |
| phosphatidylserine decarboxylase | SAMN02910353_00686 | Not Available | - | 774045 - 774905 | 32798.8 |
| predicted nucleotide-binding protein, sugar kinase/hsp70/actin superfamily | SAMN02910353_00687 | Not Available | - | 774905 - 776137 | 46442.6 |
| coa-substrate-specific enzyme activase, putative | SAMN02910353_00688 | Not Available | - | 776130 - 779102 | 108368.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.