Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN02910353_00628 | Not Available | + | 704429 - 705406 | 36735.5 |
| hypothetical protein | SAMN02910353_00629 | Not Available | + | 705387 - 705875 | 18690.6 |
| caax protease self-immunity | SAMN02910353_00630 | Not Available | - | 705870 - 706781 | 33614.0 |
| hypothetical protein | SAMN02910353_00631 | Not Available | + | 706977 - 707210 | 8208.9 |
| yidc/oxa1 family membrane protein insertase | SAMN02910353_00632 | Not Available | - | 707449 - 709491 | 78924.5 |
| hypothetical protein | SAMN02910353_00633 | Not Available | - | 709507 - 709776 | 9556.53 |
| d-alanyl-d-alanine carboxypeptidase | SAMN02910353_00634 | Not Available | - | 709980 - 711080 | 41641.5 |
| hypothetical protein | SAMN02910353_00635 | Not Available | + | 711534 - 713093 | 57315.5 |
| large conductance mechanosensitive channel | SAMN02910353_00636 | Not Available | + | 713121 - 713555 | 15835.8 |
| zinc-ribbon domain-containing protein | SAMN02910353_00637 | Not Available | + | 714062 - 715630 | 56433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.