Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN02910353_02793 | Not Available | + | 3205613 - 3206059 | 16800.3 |
| acetyltransferase (gnat) family protein | SAMN02910353_02794 | Not Available | + | 3206056 - 3206505 | 17228.7 |
| putative zincin peptidase | SAMN02910353_02795 | Not Available | + | 3206544 - 3207119 | 20810.0 |
| nyn domain-containing protein | SAMN02910353_02796 | Not Available | - | 3207198 - 3208118 | 35538.2 |
| Hypothetical protein | SAMN02910353_02797 | Not Available | + | 3208183 - 3208713 | 19997.1 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN02910353_02798 | Not Available | + | 3209541 - 3210032 | 19053.1 |
| sigma-70, region 4 | SAMN02910353_02799 | Not Available | + | 3210032 - 3210466 | 17257.9 |
| Antirepressor kilac domain-containing protein | SAMN02910353_02800 | Not Available | + | 3210932 - 3211696 | 29413.2 |
| Attr | Not Available | Not Available | + | 3211834 - 3211845 | Not Available |
| dna binding domain-containing protein, excisionase family | SAMN02910353_02801 | Not Available | + | 3211947 - 3212171 | 8521.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.