Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidine and deoxycytidylate deaminase zinc-binding region | SAMN02910353_00587 | Not Available | + | 657753 - 658373 | 22984.4 |
| aldose 1-epimerase | SAMN02910353_00588 | Not Available | + | 658440 - 659450 | 38464.4 |
| dna replication and repair protein recr | SAMN02910353_00589 | Not Available | - | 659518 - 660120 | 21914.7 |
| hypothetical protein | SAMN02910353_00590 | Not Available | - | 660126 - 660476 | 12346.9 |
| dna polymerase-3 subunit gamma/tau | SAMN02910353_00591 | Not Available | - | 660499 - 662127 | 60148.8 |
| hypothetical protein | SAMN02910353_00592 | Not Available | - | 662144 - 663040 | 33763.9 |
| hemolysin, contains cbs domains | SAMN02910353_00594 | Not Available | + | 663621 - 664880 | 46296.7 |
| small subunit ribosomal protein s20 | SAMN02910353_00595 | Not Available | - | 664980 - 665240 | 9136.34 |
| spore protease | SAMN02910353_00596 | Not Available | + | 665464 - 666312 | 30039.0 |
| sugar phosphate isomerase/epimerase | SAMN02910353_00597 | Not Available | + | 666455 - 667252 | 30119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.