Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdsl-like lipase/acylhydrolase family protein | SAMN02910353_00577 | Not Available | + | 643117 - 644820 | 62114.3 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN02910353_00578 | Not Available | + | 644899 - 645369 | 17101.5 |
| putative peptidoglycan binding domain-containing protein | SAMN02910353_00579 | Not Available | - | 645408 - 645920 | 18944.7 |
| peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing protein | SAMN02910353_00580 | Not Available | - | 645924 - 647321 | 52221.4 |
| hypothetical protein | SAMN02910353_00581 | Not Available | - | 647332 - 648114 | 28344.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00582 | Not Available | + | 648538 - 650220 | 64777.8 |
| cohesin domain-containing protein | SAMN02910353_00583 | Not Available | - | 650612 - 651988 | 48626.9 |
| leucine rich repeat-containing protein | SAMN02910353_00584 | Not Available | - | 652009 - 655264 | 117915.0 |
| citrate synthase | SAMN02910353_00585 | Not Available | + | 655695 - 657062 | 51283.3 |
| uncharacterized membrane protein yhah, duf805 family | SAMN02910353_00586 | Not Available | + | 657097 - 657750 | 24330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.