Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent protease (includes spoivfb) | SAMN02910353_00547 | Not Available | + | 604263 - 604949 | 25635.6 |
| condensin subunit scpa | SAMN02910353_00548 | Not Available | + | 604949 - 605707 | 29074.5 |
| segregation and condensation protein b | SAMN02910353_00549 | Not Available | + | 605677 - 606345 | 24040.3 |
| hypothetical protein | SAMN02910353_00550 | Not Available | + | 606369 - 607244 | 32501.9 |
| sporulation protein ytfj | SAMN02910353_00551 | Not Available | + | 607255 - 607671 | 14439.2 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02910353_00552 | Not Available | + | 607733 - 608854 | 40104.6 |
| 23s rrna pseudouridine2605 synthase | SAMN02910353_00553 | Not Available | + | 608889 - 609596 | 26542.6 |
| hypothetical protein | SAMN02910353_00554 | Not Available | + | 609598 - 609969 | 13569.2 |
| homoserine o-succinyltransferase | SAMN02910353_00555 | Not Available | + | 609997 - 610944 | 37293.2 |
| hypothetical protein | SAMN02910353_00556 | Not Available | + | 610994 - 611629 | 23257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.