Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport protein (azld) | SAMN02910353_00517 | Not Available | - | 563763 - 564062 | 10749.8 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN02910353_00518 | Not Available | - | 564059 - 564853 | 28078.1 |
| cation diffusion facilitator family transporter | SAMN02910353_00519 | Not Available | + | 564962 - 566122 | 42785.7 |
| uncharacterized membrane protein ysda, duf1294 family | SAMN02910353_00520 | Not Available | + | 566125 - 566418 | 10870.6 |
| s-adenosylmethionine decarboxylase | SAMN02910353_00521 | Not Available | + | 566795 - 567565 | 29180.6 |
| arginine/lysine/ornithine decarboxylase | SAMN02910353_00522 | Not Available | + | 567558 - 569006 | 53143.2 |
| hypothetical protein | SAMN02910353_00523 | Not Available | + | 569097 - 569600 | 17912.3 |
| spermidine synthase | SAMN02910353_00524 | Not Available | + | 569616 - 570467 | 32953.2 |
| agmatinase | SAMN02910353_00525 | Not Available | + | 570457 - 571308 | 31380.1 |
| protein of unknown function | SAMN02910353_00526 | Not Available | + | 571313 - 571906 | 22472.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.