Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system atp-binding protein | SAMN02910353_00497 | Not Available | - | 539534 - 540352 | 29975.9 |
| nitt/taut family transport system substrate-binding protein | SAMN02910353_00498 | Not Available | - | 540339 - 541526 | 43023.7 |
| nitrogen fixation protein nifu | SAMN02910353_00499 | Not Available | - | 541794 - 542210 | 14833.8 |
| cysteine desulfurase | SAMN02910353_00500 | Not Available | - | 542223 - 543413 | 43290.2 |
| acetate kinase | SAMN02910353_00501 | Not Available | - | 543585 - 544784 | 43340.7 |
| copper chaperone copz | SAMN02910353_00502 | Not Available | - | 544976 - 545227 | 9147.96 |
| leucine rich repeat-containing protein | SAMN02910353_00503 | Not Available | - | 545376 - 546521 | 41024.9 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN02910353_00504 | Not Available | - | 546587 - 548824 | 84828.1 |
| p-loop protein of unknown function | SAMN02910353_00505 | Not Available | - | 548834 - 550159 | 49400.3 |
| terb-c domain-containing protein | SAMN02910353_00506 | Not Available | - | 550172 - 551653 | 57571.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.