Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa ligase | SAMN02910353_00487 | Not Available | - | 529655 - 530995 | 50089.5 |
| pyruvate ferredoxin oxidoreductase beta subunit | SAMN02910353_00488 | Not Available | - | 531095 - 532000 | 32520.6 |
| pyruvate ferredoxin oxidoreductase alpha subunit | SAMN02910353_00489 | Not Available | - | 531993 - 533159 | 42242.6 |
| pyruvate ferredoxin oxidoreductase delta subunit | SAMN02910353_00490 | Not Available | - | 533156 - 533449 | 10748.1 |
| pyruvate ferredoxin oxidoreductase gamma subunit | SAMN02910353_00491 | Not Available | - | 533446 - 533961 | 18205.9 |
| dna-binding transcriptional regulator, lysr family | SAMN02910353_00492 | Not Available | - | 534144 - 535052 | 34141.0 |
| cysteine synthase a | SAMN02910353_00493 | Not Available | - | 535063 - 535974 | 32360.6 |
| cystathionine beta-lyase | SAMN02910353_00494 | Not Available | - | 535974 - 537134 | 41791.9 |
| methyltransferase, tigr00027 family | SAMN02910353_00495 | Not Available | - | 537270 - 538166 | 34406.4 |
| nitt/taut family transport system permease protein | SAMN02910353_00496 | Not Available | - | 538617 - 539537 | 33694.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.