Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf218 domain-containing protein | SAMN02910353_00477 | Not Available | - | 520387 - 521151 | 28244.3 |
| hypothetical protein | SAMN02910353_00478 | Not Available | - | 521186 - 522022 | 31309.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN02910353_00479 | Not Available | - | 522233 - 523054 | 30135.2 |
| trna1(val) a37 n6-methylase trmn6 | SAMN02910353_00480 | Not Available | - | 523051 - 523773 | 27009.8 |
| nicotinamidase-related amidase | SAMN02910353_00481 | Not Available | - | 523774 - 524310 | 20379.2 |
| pp_00470 | SAMN02910353_00482 | Not Available | - | 524307 - 525383 | Not Available |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN02910353_00483 | Not Available | - | 525376 - 526041 | 24635.8 |
| uncharacterized protein yvpb | SAMN02910353_00484 | Not Available | - | 526038 - 527087 | 38701.5 |
| predicted nucleotidyltransferase | SAMN02910353_00485 | Not Available | - | 527091 - 528293 | 43714.8 |
| aminotransferase | SAMN02910353_00486 | Not Available | - | 528410 - 529576 | 43940.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.