Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN02910353_00457 | Not Available | - | 502294 - 503079 | 28316.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN02910353_00458 | Not Available | - | 503066 - 504961 | 69713.8 |
| geranylgeranyl diphosphate synthase, type ii | SAMN02910353_00459 | Not Available | - | 504999 - 505862 | 31746.1 |
| exodeoxyribonuclease vii small subunit | SAMN02910353_00460 | Not Available | - | 505846 - 506058 | 7606.07 |
| exodeoxyribonuclease vii large subunit | SAMN02910353_00461 | Not Available | - | 506063 - 507253 | 43007.7 |
| n6-l-threonylcarbamoyladenine synthase | SAMN02910353_00462 | Not Available | - | 507244 - 508245 | 36272.6 |
| nusb antitermination factor | SAMN02910353_00463 | Not Available | - | 508193 - 508603 | 15439.2 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN02910353_00464 | Not Available | - | 508624 - 508959 | 11578.3 |
| stage iii sporulation protein ah | SAMN02910353_00465 | Not Available | - | 509061 - 509624 | 20292.3 |
| stage iii sporulation protein ag | SAMN02910353_00466 | Not Available | - | 509635 - 510165 | 18917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.