Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative radical sam enzyme, tigr03279 family | SAMN02910353_00427 | Not Available | - | 470820 - 472121 | 49138.8 |
| large subunit ribosomal protein l32 | SAMN02910353_00428 | Not Available | - | 472225 - 472410 | 6916.55 |
| uncharacterized protein | SAMN02910353_00429 | Not Available | - | 472435 - 472890 | 16992.1 |
| hypothetical protein | SAMN02910353_00430 | Not Available | - | 472992 - 473399 | 15007.0 |
| glucose-6-phosphate isomerase | SAMN02910353_00431 | Not Available | - | 473461 - 474795 | 48596.9 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02910353_00432 | Not Available | - | 474939 - 476075 | 41761.1 |
| d-alanyl-d-alanine carboxypeptidase | SAMN02910353_00433 | Not Available | - | 476154 - 477119 | 35010.1 |
| oxaloacetate decarboxylase, beta subunit | SAMN02910353_00434 | Not Available | - | 477770 - 478990 | 43172.1 |
| biotin carboxyl carrier protein | SAMN02910353_00435 | Not Available | - | 479003 - 479404 | 13296.2 |
| oxaloacetate decarboxylase, gamma chain | SAMN02910353_00436 | Not Available | - | 479407 - 479811 | 14303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.