Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00417 | Not Available | + | 458094 - 460013 | 71996.4 |
| edd domain protein, degv family | SAMN02910353_00418 | Not Available | - | 460128 - 461009 | 32092.6 |
| methionyl-trna synthetase | SAMN02910353_00419 | Not Available | + | 461243 - 463261 | 77341.2 |
| glutamyl-trna synthetase | SAMN02910353_00420 | Not Available | - | 463330 - 464778 | 54443.1 |
| asparagine synthase (glutamine-hydrolysing) | SAMN02910353_00421 | Not Available | - | 464797 - 466335 | 59276.3 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN02910353_00422 | Not Available | - | 466350 - 467342 | 35397.2 |
| glycerol-3-phosphate acyltransferase plsy | SAMN02910353_00423 | Not Available | - | 467360 - 468034 | 24204.5 |
| gtp-binding protein | SAMN02910353_00424 | Not Available | - | 468034 - 469362 | 49661.3 |
| cell wall assembly regulator smi1 | SAMN02910353_00425 | Not Available | - | 469391 - 470023 | 23448.6 |
| trax protein | SAMN02910353_00426 | Not Available | - | 470034 - 470810 | 30356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.