Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yhfc | SAMN02910353_00407 | Not Available | - | 449089 - 449871 | 29057.3 |
| hypothetical protein | SAMN02910353_00408 | Not Available | - | 449871 - 451067 | 44001.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00409 | Not Available | - | 451099 - 452163 | 40624.0 |
| electron transport complex protein rnfc | SAMN02910353_00410 | Not Available | + | 452417 - 453694 | 46070.5 |
| electron transport complex protein rnfd | SAMN02910353_00411 | Not Available | + | 453704 - 454660 | 34101.7 |
| electron transport complex protein rnfg | SAMN02910353_00412 | Not Available | + | 454653 - 455180 | 18320.8 |
| electron transport complex protein rnfe | SAMN02910353_00413 | Not Available | + | 455173 - 455856 | 24165.6 |
| electron transport complex protein rnfa | SAMN02910353_00414 | Not Available | + | 455856 - 456434 | 20774.4 |
| electron transport complex, rnfabcdge type, b subunit | SAMN02910353_00415 | Not Available | + | 456447 - 457241 | 27199.3 |
| guanylate kinase | SAMN02910353_00416 | Not Available | - | 457279 - 457860 | 22359.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.