Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endoglucanase | SAMN02910353_00397 | Not Available | - | 438999 - 440009 | 35542.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_00398 | Not Available | + | 440223 - 440789 | 21202.9 |
| hypothetical protein | SAMN02910353_00399 | Not Available | + | 440804 - 441703 | 34569.4 |
| phosphoribosylformylglycinamidine synthase | SAMN02910353_00400 | Not Available | - | 441754 - 445458 | 135026.0 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN02910353_00401 | Not Available | - | 445525 - 446838 | 49277.0 |
| pts hpr component phosphorylation site | SAMN02910353_00402 | Not Available | + | 447119 - 447349 | 8634.45 |
| hypothetical protein | SAMN02910353_00403 | Not Available | + | 447526 - 447744 | 7841.79 |
| small subunit ribosomal protein s18 | SAMN02910353_00404 | Not Available | - | 447867 - 448109 | 9337.66 |
| single-strand dna-binding protein | SAMN02910353_00405 | Not Available | - | 448148 - 448630 | 17958.7 |
| small subunit ribosomal protein s6 | SAMN02910353_00406 | Not Available | - | 448657 - 448953 | 11332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.