Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannan endo-1,4-beta-mannosidase | SAMN02910353_00357 | Not Available | - | 393854 - 395779 | 71254.9 |
| carbamoyl-phosphate synthase large subunit | SAMN02910353_00358 | Not Available | - | 395958 - 399149 | 117714.0 |
| carbamoyl-phosphate synthase small subunit | SAMN02910353_00359 | Not Available | - | 399151 - 400254 | 40345.9 |
| orotidine-5'-phosphate decarboxylase | SAMN02910353_00360 | Not Available | - | 400337 - 401263 | 34137.0 |
| dihydroorotase | SAMN02910353_00361 | Not Available | - | 401309 - 402577 | 45532.1 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN02910353_00362 | Not Available | - | 402597 - 403121 | 19063.9 |
| hypothetical protein | SAMN02910353_00363 | Not Available | - | 403329 - 403610 | 10324.9 |
| trna (guanine-n7-)-methyltransferase | SAMN02910353_00364 | Not Available | - | 403614 - 404276 | 25914.0 |
| putative esterase | SAMN02910353_00365 | Not Available | + | 404729 - 406354 | 59423.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_00366 | Not Available | + | 406479 - 407033 | 21528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.