Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | SAMN02910353_00347 | Not Available | + | 380844 - 381944 | 38509.8 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN02910353_00348 | Not Available | + | 381958 - 382986 | 38412.1 |
| asparaginyl-trna synthetase | SAMN02910353_00349 | Not Available | + | 383370 - 384740 | 51319.1 |
| hypothetical protein | SAMN02910353_00350 | Not Available | + | 384765 - 385574 | 30177.8 |
| aspartate-ammonia ligase | SAMN02910353_00351 | Not Available | + | 385650 - 386660 | 38142.4 |
| arabinogalactan endo-1,4-beta-galactosidase | SAMN02910353_00352 | Not Available | + | 386784 - 388751 | 72785.5 |
| cysteine synthase a | SAMN02910353_00353 | Not Available | - | 388823 - 389749 | 32746.3 |
| 4fe-4s dicluster domain-containing protein | SAMN02910353_00354 | Not Available | - | 390078 - 390863 | 29145.1 |
| hypothetical protein | SAMN02910353_00355 | Not Available | - | 390928 - 393117 | 83981.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_00356 | Not Available | - | 393114 - 393680 | 20970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.