Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small conductance mechanosensitive channel | SAMN02910353_00317 | Not Available | - | 347298 - 348197 | 32488.0 |
| Trna-arg | Not Available | Not Available | + | 348593 - 348669 | Not Available |
| putative two-component system response regulator | SAMN02910353_00319 | Not Available | + | 349053 - 350762 | 65388.4 |
| 6-phosphofructokinase 1 | SAMN02910353_00320 | Not Available | - | 350864 - 351946 | 38544.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00321 | Not Available | - | 351987 - 354215 | 83256.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910353_00322 | Not Available | + | 354477 - 355154 | 26064.3 |
| signal transduction histidine kinase | SAMN02910353_00323 | Not Available | + | 355141 - 356598 | 55563.1 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN02910353_00324 | Not Available | + | 356851 - 358767 | 71880.5 |
| fatty-acyl-coa synthase | SAMN02910353_00325 | Not Available | + | 358899 - 361427 | 94898.0 |
| hypothetical protein | SAMN02910353_00326 | Not Available | - | 361473 - 361907 | 16323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.