Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | SAMN02910353_00297 | Not Available | + | 321492 - 323366 | 71260.9 |
| predicted thioesterase | SAMN02910353_00298 | Not Available | + | 323366 - 323758 | 13694.3 |
| serine protease do | SAMN02910353_00299 | Not Available | + | 323920 - 325317 | 49508.9 |
| double zinc ribbon | SAMN02910353_00300 | Not Available | - | 325408 - 325818 | 13892.1 |
| tm2 domain-containing membrane protein yozv | SAMN02910353_00301 | Not Available | - | 325839 - 326285 | 14737.2 |
| rubrerythrin | SAMN02910353_00302 | Not Available | - | 326389 - 326928 | 20406.8 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN02910353_00303 | Not Available | - | 327021 - 327968 | 35713.7 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN02910353_00304 | Not Available | + | 328247 - 330334 | 74672.5 |
| atp-dependent helicase/nuclease subunit b | SAMN02910353_00305 | Not Available | + | 330402 - 333734 | 125432.0 |
| dna helicase/exodeoxyribonuclease v, subunit a | SAMN02910353_00306 | Not Available | + | 333734 - 337357 | 136097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.