Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme m protein | SAMN02910353_00276 | Not Available | - | 296101 - 297600 | 56538.9 |
| uracil phosphoribosyltransferase | SAMN02910353_00277 | Not Available | - | 297983 - 298609 | 22507.6 |
| ribose 5-phosphate isomerase b | SAMN02910353_00278 | Not Available | - | 298622 - 299059 | 15523.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN02910353_00279 | Not Available | - | 299062 - 299760 | 24666.8 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN02910353_00280 | Not Available | - | 299741 - 300181 | 15962.6 |
| formate-tetrahydrofolate ligase | SAMN02910353_00281 | Not Available | - | 300183 - 301862 | 60125.0 |
| hypothetical protein | SAMN02910353_00282 | Not Available | + | 302290 - 303231 | 34673.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN02910353_00283 | Not Available | - | 303274 - 303903 | 23158.1 |
| glutamate dehydrogenase (nadp+) | SAMN02910353_00284 | Not Available | - | 304092 - 305459 | 49275.8 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN02910353_00285 | Not Available | - | 305999 - 307258 | 45474.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.