Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SAMN02910353_03054 | Not Available | + | 3491463 - 3492110 | 24198.1 |
| hypothetical protein | SAMN02910353_03055 | Not Available | + | 3492129 - 3492350 | 8526.95 |
| hypothetical protein | SAMN02910353_03056 | Not Available | + | 3492351 - 3492566 | 8491.11 |
| helix-turn-helix | SAMN02910353_03057 | Not Available | + | 3492890 - 3493249 | 13675.6 |
| helicase conserved c-terminal domain-containing protein | SAMN02910353_03058 | Not Available | + | 3493312 - 3495570 | 85704.0 |
| hypothetical protein | SAMN02910353_03059 | Not Available | + | 3495567 - 3496103 | 21209.4 |
| hypothetical protein | SAMN02910353_03060 | Not Available | - | 3496638 - 3498644 | 76740.3 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN02910353_03061 | Not Available | - | 3499365 - 3499916 | 21148.7 |
| protein of unknown function | SAMN02910353_03062 | Not Available | + | 3500395 - 3500679 | 10967.2 |
| putative amidoligase enzyme | SAMN02910353_03063 | Not Available | + | 3500731 - 3501831 | 42797.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.