Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative efflux protein, mate family | SAMN02910353_00205 | Not Available | + | 216903 - 218282 | 49004.0 |
| hypothetical protein | SAMN02910353_00206 | Not Available | - | 218368 - 220425 | 76883.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_00207 | Not Available | - | 220422 - 220913 | 18859.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00208 | Not Available | + | 221137 - 222432 | 49457.6 |
| protein of unknown function duf45 | SAMN02910353_00209 | Not Available | - | 222885 - 225461 | 100459.0 |
| hypothetical protein | SAMN02910353_00210 | Not Available | - | 225476 - 226105 | 24133.7 |
| hypothetical protein | SAMN02910353_00211 | Not Available | - | 226187 - 226648 | 17640.5 |
| nitroreductase | SAMN02910353_00212 | Not Available | - | 226751 - 227254 | 19252.1 |
| hypothetical protein | SAMN02910353_00213 | Not Available | - | 227523 - 228275 | 29172.9 |
| hypothetical protein | SAMN02910353_00214 | Not Available | - | 228325 - 228495 | 6445.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.