Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative head-tail adaptor | SAMN02910353_01521 | Not Available | - | 1744326 - 1744679 | 13211.6 |
| uncharacterized phage protein (possible dna packaging) | SAMN02910353_01522 | Not Available | - | 1744679 - 1744951 | 10448.5 |
| Major capsid protein gp5 | SAMN02910353_01523 | Not Available | - | 1744948 - 1746141 | 44185.2 |
| Putative clp peptidase | SAMN02910353_01524 | Not Available | - | 1746157 - 1746996 | 30979.3 |
| 3''-phosphoadenosine 5''-phosphosulfate sulfotransferase/fad synthetase-related enzyme | SAMN02910353_01525 | Not Available | - | 1746989 - 1748005 | 38965.6 |
| Putative portal protein | SAMN02910353_01526 | Not Available | - | 1747986 - 1749248 | 47567.5 |
| hypothetical protein | SAMN02910353_01527 | Not Available | + | 1749366 - 1750283 | 35297.5 |
| Terminase large subunit | SAMN02910353_01528 | Not Available | - | 1750309 - 1751910 | 60903.4 |
| hypothetical protein | SAMN02910353_01529 | Not Available | - | 1751965 - 1752204 | 8847.46 |
| hypothetical protein | SAMN02910353_01530 | Not Available | - | 1752467 - 1752811 | 13186.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.