Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | SAMN02910353_02992 | Not Available | - | 3426163 - 3428022 | 71636.3 |
| tir domain-containing protein | SAMN02910353_02993 | Not Available | - | 3428028 - 3429491 | 55931.1 |
| chitinase, gh18 family | SAMN02910353_02994 | Not Available | + | 3429767 - 3430909 | 42590.7 |
| hypothetical protein | SAMN02910353_02995 | Not Available | - | 3430971 - 3431783 | 28306.3 |
| pare toxin of type ii toxin-antitoxin system, parde | SAMN02910353_02996 | Not Available | - | 3432064 - 3432369 | 11543.1 |
| relb antitoxin | SAMN02910353_02997 | Not Available | - | 3432359 - 3432658 | 10828.8 |
| Trna-pseudo | Not Available | Not Available | + | 3432946 - 3433030 | Not Available |
| hypothetical protein | SAMN02910353_02999 | Not Available | - | 3433072 - 3433353 | 10836.8 |
| iron complex transport system atp-binding protein | SAMN02910353_03000 | Not Available | - | 3433380 - 3434465 | 38969.3 |
| iron complex transport system permease protein | SAMN02910353_03001 | Not Available | - | 3434466 - 3435488 | 35520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.