Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleotidyltransferase | SAMN02910353_02972 | Not Available | - | 3399048 - 3399389 | 12585.1 |
| resolvase, n terminal domain | SAMN02910353_02973 | Not Available | - | 3399517 - 3400815 | 49195.3 |
| glucuronoarabinoxylan endo-1,4-beta-xylanase | SAMN02910353_02974 | Not Available | - | 3400816 - 3401857 | 38073.7 |
| hypothetical protein | SAMN02910353_02975 | Not Available | + | 3402137 - 3402256 | 4055.19 |
| putative amidoligase enzyme | SAMN02910353_02976 | Not Available | + | 3402195 - 3403373 | 45707.9 |
| hypothetical protein | SAMN02910353_02977 | Not Available | + | 3403373 - 3403543 | 6113.74 |
| glutamine amidotransferase domain-containing protein | SAMN02910353_02978 | Not Available | + | 3403545 - 3404519 | 37070.9 |
| site-specific dna recombinase | SAMN02910353_02979 | Not Available | + | 3404645 - 3405256 | 23431.5 |
| hypothetical protein | SAMN02910353_02980 | Not Available | - | 3405186 - 3405698 | 19186.9 |
| leucine rich repeat-containing protein | SAMN02910353_02981 | Not Available | - | 3406095 - 3411359 | 186522.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.