Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hpt domain-containing protein | SAMN02910353_02962 | Not Available | - | 3388678 - 3389013 | 12589.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_02963 | Not Available | - | 3389000 - 3390712 | 65253.4 |
| ferrous iron transport protein a | SAMN02910353_02964 | Not Available | + | 3391248 - 3391460 | 7666.62 |
| ferrous iron transport protein a | SAMN02910353_02965 | Not Available | + | 3391474 - 3391695 | 8115.14 |
| ferrous iron transport protein b | SAMN02910353_02966 | Not Available | + | 3391770 - 3394184 | 87477.0 |
| virus attachment protein p12 family protein | SAMN02910353_02967 | Not Available | + | 3394197 - 3394364 | 5928.54 |
| hypothetical protein | SAMN02910353_02968 | Not Available | + | 3394448 - 3394747 | 10946.2 |
| hypothetical protein | SAMN02910353_02969 | Not Available | + | 3395122 - 3395862 | 26945.2 |
| putative dna-binding domain-containing protein | SAMN02910353_02970 | Not Available | - | 3396491 - 3398323 | 71106.7 |
| uncharacterized protein, contains hepn domain, upf0332 family | SAMN02910353_02971 | Not Available | - | 3398662 - 3399063 | 15279.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.