Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02952 | Not Available | - | 3376973 - 3377524 | 21970.6 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN02910353_02953 | Not Available | - | 3377700 - 3378821 | 43873.6 |
| ala-trna(pro) deacylase | SAMN02910353_02954 | Not Available | - | 3379248 - 3379793 | 20678.8 |
| fic family protein | SAMN02910353_02955 | Not Available | - | 3379830 - 3380879 | 40201.1 |
| Trna-trp | Not Available | Not Available | + | 3381274 - 3381349 | Not Available |
| acyl-coa thioester hydrolase | SAMN02910353_02957 | Not Available | + | 3381514 - 3381930 | 16027.4 |
| iron (metal) dependent repressor, dtxr family | SAMN02910353_02958 | Not Available | + | 3382266 - 3382655 | 14309.2 |
| hypothetical protein | SAMN02910353_02959 | Not Available | + | 3382642 - 3384024 | 52065.0 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN02910353_02960 | Not Available | + | 3384021 - 3385358 | 49357.7 |
| signal transduction histidine kinase | SAMN02910353_02961 | Not Available | - | 3385567 - 3388668 | 115560.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.