Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine/udp-n- acetylgalactosaminediphosphorylase | SAMN02910353_02941 | Not Available | + | 3364356 - 3365570 | 45603.6 |
| hypothetical protein | SAMN02910353_02942 | Not Available | + | 3365795 - 3367402 | 60358.4 |
| flavodoxin | SAMN02910353_02943 | Not Available | + | 3367669 - 3368781 | 40003.0 |
| alanine dehydrogenase | SAMN02910353_02944 | Not Available | - | 3368845 - 3369957 | 39593.8 |
| alpha-n-arabinofuranosidase | SAMN02910353_02945 | Not Available | + | 3370173 - 3371651 | 55144.8 |
| vanz like family protein | SAMN02910353_02946 | Not Available | - | 3371683 - 3372165 | 18189.5 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN02910353_02947 | Not Available | + | 3372639 - 3374147 | 56262.8 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN02910353_02948 | Not Available | + | 3374246 - 3376084 | 67710.2 |
| transposase is200 like | SAMN02910353_02950 | Not Available | + | 3376264 - 3376527 | 10294.7 |
| hypothetical protein | SAMN02910353_02951 | Not Available | - | 3376528 - 3376932 | 16306.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.