Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | SAMN02910353_02921 | Not Available | - | 3336493 - 3337710 | 46280.2 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN02910353_02922 | Not Available | - | 3337711 - 3338349 | 24433.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN02910353_02923 | Not Available | - | 3338349 - 3339635 | 47882.8 |
| hypothetical protein | SAMN02910353_02924 | Not Available | - | 3340227 - 3340436 | 8176.89 |
| glutamine amidotransferase domain-containing protein | SAMN02910353_02925 | Not Available | - | 3340449 - 3341429 | 37195.2 |
| hypothetical protein | SAMN02910353_02926 | Not Available | - | 3341430 - 3341609 | 6377.81 |
| putative amidoligase enzyme | SAMN02910353_02927 | Not Available | - | 3341609 - 3342715 | 42818.9 |
| protein of unknown function | SAMN02910353_02928 | Not Available | - | 3342769 - 3343053 | 10932.0 |
| hypothetical protein | SAMN02910353_02929 | Not Available | + | 3343591 - 3343866 | 10744.1 |
| hypothetical protein | SAMN02910353_02930 | Not Available | + | 3343848 - 3345896 | 78545.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.