Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhamnosyltransferase | SAMN02910353_02911 | Not Available | - | 3327183 - 3328106 | 35123.6 |
| l-ribulose-5-phosphate 4-epimerase | SAMN02910353_02912 | Not Available | - | 3328128 - 3328823 | 25605.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN02910353_02913 | Not Available | - | 3328840 - 3329889 | 37948.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN02910353_02914 | Not Available | - | 3329896 - 3330612 | 26534.0 |
| lipopolysaccharide cholinephosphotransferase | SAMN02910353_02915 | Not Available | - | 3330605 - 3331402 | 31132.8 |
| pyruvyltransferase | SAMN02910353_02916 | Not Available | - | 3331449 - 3332324 | 33501.3 |
| hypothetical protein | SAMN02910353_02917 | Not Available | - | 3332343 - 3333560 | 47137.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN02910353_02918 | Not Available | - | 3333633 - 3334406 | 28214.7 |
| biotin carboxylase | SAMN02910353_02919 | Not Available | - | 3334406 - 3335698 | 48764.5 |
| l-ascorbate 6-phosphate lactonase | SAMN02910353_02920 | Not Available | - | 3335713 - 3336483 | 28336.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.