Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator, arabinose operon regulatory protein | SAMN02910353_02890 | Not Available | + | 3304325 - 3305110 | 30616.4 |
| hypothetical protein | SAMN02910353_02891 | Not Available | - | 3305222 - 3306034 | 28319.3 |
| carbohydrate binding domain-containing protein | SAMN02910353_02892 | Not Available | + | 3306740 - 3309871 | 113925.0 |
| glucuronoarabinoxylan endo-1,4-beta-xylanase | SAMN02910353_02893 | Not Available | + | 3310072 - 3311087 | 37076.4 |
| transposase is200 like | SAMN02910353_02894 | Not Available | - | 3311088 - 3311318 | 9098.07 |
| hypothetical protein | SAMN02910353_02895 | Not Available | - | 3311689 - 3312216 | 19730.0 |
| transposase | SAMN02910353_02896 | Not Available | + | 3312310 - 3313821 | 57988.3 |
| udp-glucose 4-epimerase | SAMN02910353_02898 | Not Available | - | 3313971 - 3314993 | 37660.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN02910353_02899 | Not Available | - | 3315056 - 3315664 | 22851.9 |
| dtdp-4-dehydrorhamnose reductase | SAMN02910353_02900 | Not Available | - | 3315666 - 3316553 | 32745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.