Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| subtilase family protein | SAMN02910353_02880 | Not Available | + | 3285545 - 3288025 | 92104.8 |
| hypothetical protein | SAMN02910353_02881 | Not Available | - | 3288658 - 3291360 | 99075.5 |
| hypothetical protein | SAMN02910353_02882 | Not Available | - | 3291382 - 3294369 | 106305.0 |
| dna-binding transcriptional regulator, laci/purr family | SAMN02910353_02883 | Not Available | + | 3294588 - 3296741 | 81869.0 |
| rhamnogalacturonan endolyase | SAMN02910353_02884 | Not Available | + | 3296996 - 3299566 | 92982.1 |
| tigr02172 family protein | SAMN02910353_02885 | Not Available | - | 3299636 - 3300790 | 43018.6 |
| hypothetical protein | SAMN02910353_02886 | Not Available | + | 3300919 - 3301398 | 17956.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN02910353_02887 | Not Available | - | 3301204 - 3302079 | 32859.6 |
| gdsl-like lipase/acylhydrolase family protein | SAMN02910353_02888 | Not Available | - | 3302193 - 3303464 | 46306.1 |
| sugar binding domain of laci family protein | SAMN02910353_02889 | Not Available | - | 3303403 - 3304164 | 28614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.