Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase | SAMN02910353_02818 | Not Available | + | 3233741 - 3234856 | 40967.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN02910353_02819 | Not Available | + | 3235320 - 3235919 | 23284.8 |
| mrna interferase mazf | SAMN02910353_02820 | Not Available | + | 3236398 - 3236757 | 13453.6 |
| atp-dependent dna helicase ding | SAMN02910353_02821 | Not Available | + | 3236757 - 3238658 | 73567.1 |
| hypothetical protein | SAMN02910353_02822 | Not Available | + | 3238651 - 3238830 | 6763.17 |
| site-specific dna recombinase | SAMN02910353_02823 | Not Available | + | 3239029 - 3240570 | 59606.6 |
| recombinase | SAMN02910353_02824 | Not Available | + | 3240676 - 3241572 | 34205.1 |
| site-specific dna recombinase | SAMN02910353_02825 | Not Available | + | 3241544 - 3243151 | 61789.6 |
| helix-turn-helix | SAMN02910353_02826 | Not Available | - | 3243251 - 3243493 | 8936.0 |
| site-specific recombinase xerc | SAMN02910353_02827 | Not Available | + | 3243945 - 3245048 | 43071.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.