Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | SAMN02910353_00187 | Not Available | - | 197286 - 197879 | 21330.6 |
| histidinol-phosphate aminotransferase | SAMN02910353_00188 | Not Available | - | 197872 - 198933 | 40244.1 |
| histidinol dehydrogenase | SAMN02910353_00189 | Not Available | - | 199048 - 200331 | 46129.1 |
| atp phosphoribosyltransferase | SAMN02910353_00190 | Not Available | - | 200347 - 200976 | 22997.3 |
| atp phosphoribosyltransferase regulatory subunit | SAMN02910353_00191 | Not Available | - | 200976 - 202169 | 44277.4 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 203910 - 204026 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 204320 - 204678 | 18.01 |
| dna polymerase-3 subunit alpha | SAMN02910353_00192 | Not Available | - | 202257 - 206591 | 162997.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN02910353_00193 | Not Available | - | 206647 - 207684 | 37040.2 |
| hypothetical protein | SAMN02910353_00194 | Not Available | - | 207689 - 208159 | 17929.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.