Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme, s subunit | SAMN02910353_02757 | Not Available | - | 3171437 - 3172669 | 46328.4 |
| type i restriction enzyme m protein | SAMN02910353_02758 | Not Available | - | 3172662 - 3174293 | 61654.2 |
| type i restriction enzyme, r subunit | SAMN02910353_02759 | Not Available | - | 3174313 - 3177504 | 123640.0 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910353_02760 | Not Available | - | 3177671 - 3177979 | 11527.0 |
| hypothetical protein | SAMN02910353_02761 | Not Available | + | 3178132 - 3178605 | 18219.6 |
| hypothetical protein | SAMN02910353_02762 | Not Available | - | 3178692 - 3178922 | 8691.16 |
| site-specific dna recombinase | SAMN02910353_02763 | Not Available | - | 3179258 - 3180883 | 63355.8 |
| hypothetical protein | SAMN02910353_02764 | Not Available | - | 3180972 - 3181178 | 7739.24 |
| hypothetical protein | SAMN02910353_02765 | Not Available | - | 3181323 - 3181772 | 17266.6 |
| hypothetical protein | SAMN02910353_02766 | Not Available | - | 3181790 - 3182128 | 12753.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.