Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02693 | Not Available | - | 3102290 - 3102826 | 19801.3 |
| cysteinyl-trna synthetase | SAMN02910353_02694 | Not Available | - | 3102844 - 3104262 | 53483.4 |
| tryptophan synthase beta chain | SAMN02910353_02696 | Not Available | - | 3105378 - 3106751 | 50079.8 |
| acetolactate synthase, large subunit | SAMN02910353_02698 | Not Available | + | 3107305 - 3108960 | 59125.7 |
| acetolactate synthase, small subunit | SAMN02910353_02699 | Not Available | + | 3108970 - 3109482 | 19130.4 |
| phosphinothricin acetyltransferase | SAMN02910353_02700 | Not Available | + | 3109531 - 3110094 | 21437.5 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN02910353_02701 | Not Available | + | 3110113 - 3111378 | 44582.8 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN02910353_02702 | Not Available | + | 3111375 - 3111869 | 17502.9 |
| hypothetical protein | SAMN02910353_02703 | Not Available | + | 3112094 - 3112570 | 16470.2 |
| 3-isopropylmalate dehydrogenase | SAMN02910353_02704 | Not Available | + | 3112580 - 3113653 | 38623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.