Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN02910353_02673 | Not Available | + | 3078070 - 3079044 | 37346.7 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910353_02674 | Not Available | + | 3079722 - 3080477 | 28407.0 |
| hypothetical protein | SAMN02910353_02675 | Not Available | + | 3080505 - 3081218 | 26574.8 |
| signal peptidase, endoplasmic reticulum-type | SAMN02910353_02676 | Not Available | + | 3081232 - 3081984 | 27707.4 |
| hypothetical protein | SAMN02910353_02677 | Not Available | + | 3082039 - 3083616 | 60149.9 |
| signal peptidase i | SAMN02910353_02678 | Not Available | + | 3084382 - 3087354 | 115780.0 |
| hypothetical protein | SAMN02910353_02679 | Not Available | + | 3087311 - 3087778 | 17949.3 |
| hypothetical protein | SAMN02910353_02680 | Not Available | + | 3087793 - 3088023 | 9010.05 |
| hypothetical protein | SAMN02910353_02681 | Not Available | - | 3088065 - 3088502 | 15832.8 |
| virus attachment protein p12 family protein | SAMN02910353_02682 | Not Available | - | 3088515 - 3088670 | 5387.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.