Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | SAMN02910353_00179 | Not Available | - | 192270 - 192671 | 14689.8 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 192891 - 193007 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 193065 - 193248 | 18.01 |
| cyclase | SAMN02910353_00180 | Not Available | - | 192675 - 193430 | 26996.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN02910353_00181 | Not Available | - | 193430 - 193951 | 19888.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN02910353_00182 | Not Available | - | 193938 - 194663 | 26273.7 |
| protoporphyrinogen ix oxidase, menaquinone-dependent (flavodoxin domain) | SAMN02910353_00183 | Not Available | - | 194660 - 195196 | 20174.4 |
| shikimate kinase | SAMN02910353_00184 | Not Available | - | 195196 - 195987 | 30169.7 |
| protein-tyrosine phosphatase | SAMN02910353_00185 | Not Available | - | 195980 - 196687 | 26500.4 |
| glutamine amidotransferase | SAMN02910353_00186 | Not Available | - | 196684 - 197286 | 21851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.