Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-n-acetylhexosaminidase | SAMN02910353_02653 | Not Available | + | 3047253 - 3048761 | 52705.4 |
| stage ii sporulation protein aa (anti-sigma f factor antagonist) | SAMN02910353_02654 | Not Available | + | 3049340 - 3049645 | 11325.1 |
| stage ii sporulation protein ab (anti-sigma f factor) | SAMN02910353_02655 | Not Available | + | 3049659 - 3050096 | 15899.2 |
| rna polymerase sporulation-specific sigma factor | SAMN02910353_02656 | Not Available | + | 3050086 - 3050745 | 24154.3 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN02910353_02657 | Not Available | - | 3050747 - 3051841 | 40091.7 |
| hypothetical protein | SAMN02910353_02658 | Not Available | - | 3051838 - 3052191 | 13030.4 |
| hypothetical protein | SAMN02910353_02659 | Not Available | - | 3052205 - 3052651 | 16719.1 |
| gtp-binding protein lepa | SAMN02910353_02660 | Not Available | - | 3052959 - 3054761 | 66855.5 |
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN02910353_02661 | Not Available | + | 3054910 - 3055881 | 36503.1 |
| hypothetical protein | SAMN02910353_02662 | Not Available | - | 3055945 - 3056883 | 36336.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.