Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ynzc, upf0291/duf896 family | SAMN02910353_02643 | Not Available | - | 3032548 - 3032841 | 11267.7 |
| aaa domain-containing protein | SAMN02910353_02644 | Not Available | + | 3033183 - 3038981 | 213254.0 |
| udp-n-acetylmuramyl tripeptide synthase | SAMN02910353_02645 | Not Available | + | 3039319 - 3040662 | 49669.7 |
| hypothetical protein | SAMN02910353_02646 | Not Available | + | 3040655 - 3041398 | 27506.0 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN02910353_02647 | Not Available | + | 3041541 - 3042845 | 48194.1 |
| penicillin binding protein transpeptidase domain-containing protein | SAMN02910353_02648 | Not Available | + | 3042877 - 3044349 | 53278.3 |
| hypothetical protein | SAMN02910353_02649 | Not Available | + | 3044394 - 3044597 | 7689.11 |
| hypothetical protein | SAMN02910353_02650 | Not Available | - | 3044678 - 3045232 | 21301.3 |
| transcriptional regulator, laci family | SAMN02910353_02651 | Not Available | + | 3045677 - 3046705 | 38044.9 |
| hypothetical protein | SAMN02910353_02652 | Not Available | + | 3046715 - 3047275 | 22008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.