Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr02172 family protein | SAMN02910353_02583 | Not Available | - | 2969893 - 2971044 | 43520.4 |
| fmn-dependent nadh-azoreductase | SAMN02910353_02584 | Not Available | - | 2971048 - 2971605 | 20547.0 |
| energy-coupling factor transport system substrate-specific component | SAMN02910353_02585 | Not Available | + | 2972136 - 2972702 | 20824.8 |
| arac-type dna-binding protein | SAMN02910353_02586 | Not Available | + | 2972699 - 2973676 | 37215.5 |
| hypothetical protein | SAMN02910353_02587 | Not Available | + | 2973676 - 2973996 | 11822.8 |
| transposase, mutator family | SAMN02910353_02588 | Not Available | + | 2974962 - 2976107 | 44509.9 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN02910353_02589 | Not Available | + | 2976171 - 2977235 | 39229.1 |
| hypothetical protein | SAMN02910353_02590 | Not Available | + | 2977494 - 2977709 | 8027.75 |
| hypothetical protein | SAMN02910353_02591 | Not Available | + | 2978258 - 2979238 | 38194.2 |
| crispr-associated protein cas2 | SAMN02910353_02592 | Not Available | - | 2979636 - 2979926 | 11136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.