Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN02910353_02572 | Not Available | - | 2957992 - 2959464 | 52270.2 |
| predicted phosphoesterase | SAMN02910353_02573 | Not Available | - | 2959679 - 2960287 | 22731.9 |
| arsenate reductase, glutaredoxin family | SAMN02910353_02574 | Not Available | - | 2960518 - 2960859 | 13273.9 |
| beta-glucosidase | SAMN02910353_02575 | Not Available | - | 2960862 - 2963633 | 101281.0 |
| transcription elongation factor grea | SAMN02910353_02576 | Not Available | + | 2963799 - 2964266 | 17337.7 |
| lysyl-trna synthetase, class 2 | SAMN02910353_02577 | Not Available | + | 2964422 - 2966035 | 61518.2 |
| hypothetical protein | SAMN02910353_02578 | Not Available | + | 2966038 - 2966298 | 9244.34 |
| hypothetical protein | SAMN02910353_02579 | Not Available | + | 2966371 - 2966532 | 5779.93 |
| acetyl-coa synthetase | SAMN02910353_02581 | Not Available | + | 2966805 - 2969156 | 88173.9 |
| hypothetical protein | SAMN02910353_02582 | Not Available | - | 2969202 - 2969504 | 11440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.