Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN02910353_02562 | Not Available | + | 2947788 - 2948450 | 25053.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN02910353_02563 | Not Available | - | 2948455 - 2948913 | 17412.8 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910353_02564 | Not Available | - | 2948962 - 2950629 | 63499.1 |
| septum site-determining protein mind | SAMN02910353_02565 | Not Available | + | 2951143 - 2951880 | 26279.2 |
| methylglyoxal synthase | SAMN02910353_02566 | Not Available | + | 2951922 - 2952323 | 14434.6 |
| histidyl-trna synthetase | SAMN02910353_02567 | Not Available | + | 2952443 - 2953786 | 50341.4 |
| aspartyl-trna synthetase | SAMN02910353_02568 | Not Available | + | 2953787 - 2955562 | 66962.2 |
| undecaprenyl-diphosphatase | SAMN02910353_02569 | Not Available | - | 2955651 - 2956544 | 32978.4 |
| hypothetical protein | SAMN02910353_02570 | Not Available | - | 2956652 - 2956867 | 7919.69 |
| hypothetical protein | SAMN02910353_02571 | Not Available | - | 2956872 - 2957966 | 40299.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.