Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | SAMN02910353_00169 | Not Available | + | 183364 - 185325 | 74020.5 |
| excinuclease abc subunit a | SAMN02910353_00170 | Not Available | + | 185345 - 188173 | 104097.0 |
| hypothetical protein | SAMN02910353_00171 | Not Available | + | 188241 - 188603 | 12776.7 |
| hypothetical protein | SAMN02910353_00172 | Not Available | + | 188624 - 189295 | 24567.5 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN02910353_00173 | Not Available | + | 189295 - 190368 | 41136.3 |
| d-alanyl-d-alanine carboxypeptidase | SAMN02910353_00174 | Not Available | - | 190399 - 190812 | 15053.7 |
| hypothetical protein | SAMN02910353_00175 | Not Available | - | 190809 - 191090 | 10556.3 |
| phosphoribosyl-atp pyrophosphatase | SAMN02910353_00176 | Not Available | - | 191129 - 191467 | 12882.2 |
| phosphoribosyl-amp cyclohydrolase | SAMN02910353_00177 | Not Available | - | 191471 - 191815 | 13170.6 |
| ribosomal protein s18 acetylase rimi | SAMN02910353_00178 | Not Available | - | 191876 - 192277 | 15730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.