Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02552 | Not Available | - | 2938069 - 2938914 | 33187.3 |
| helix-turn-helix | SAMN02910353_02553 | Not Available | - | 2939402 - 2940238 | 33345.4 |
| 3-oxoacid coa-transferase subunit a | SAMN02910353_02554 | Not Available | + | 2940672 - 2941358 | 26438.2 |
| hypothetical protein | SAMN02910353_02555 | Not Available | + | 2942344 - 2942643 | 11015.5 |
| protein of unknown function | SAMN02910353_02556 | Not Available | + | 2942630 - 2943193 | 21544.1 |
| flavodoxin, short chain | SAMN02910353_02557 | Not Available | + | 2943206 - 2943610 | 14295.6 |
| hypothetical protein | SAMN02910353_02558 | Not Available | + | 2943620 - 2945062 | 50587.3 |
| dmso/tmao reductase yedyz, heme-binding membrane subunit | SAMN02910353_02559 | Not Available | + | 2945138 - 2946481 | 49192.1 |
| rubrerythrin | SAMN02910353_02560 | Not Available | - | 2946783 - 2947334 | 20240.1 |
| anaerobic ribonucleoside-triphosphate reductase | SAMN02910353_02561 | Not Available | - | 2947403 - 2947666 | 10196.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.