Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02542 | Not Available | - | 2927427 - 2928497 | 42615.9 |
| hypothetical protein | SAMN02910353_02543 | Not Available | - | 2928490 - 2928945 | 17579.0 |
| atpase family associated with various cellular activities (aaa) | SAMN02910353_02544 | Not Available | + | 2929309 - 2931285 | 75109.4 |
| hypothetical protein | SAMN02910353_02545 | Not Available | + | 2931297 - 2931743 | 16861.1 |
| alpha/beta superfamily hydrolase | SAMN02910353_02546 | Not Available | + | 2931954 - 2932697 | 28370.2 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN02910353_02547 | Not Available | + | 2932694 - 2934961 | 87038.9 |
| leucine rich repeat-containing protein | SAMN02910353_02548 | Not Available | - | 2934996 - 2935559 | 21060.4 |
| hypothetical protein | SAMN02910353_02549 | Not Available | - | 2935549 - 2936013 | 17557.9 |
| hypothetical protein | SAMN02910353_02550 | Not Available | - | 2936031 - 2936459 | 16629.4 |
| hypothetical protein | SAMN02910353_02551 | Not Available | - | 2936473 - 2937987 | 59269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.