Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02532 | Not Available | + | 2919650 - 2920555 | 34857.5 |
| hypothetical protein | SAMN02910353_02533 | Not Available | + | 2920552 - 2921010 | 17304.9 |
| hypothetical protein | SAMN02910353_02534 | Not Available | + | 2921040 - 2922083 | 41468.6 |
| hypothetical protein | SAMN02910353_02535 | Not Available | + | 2922208 - 2923209 | 40057.9 |
| protein of unknown function | SAMN02910353_02536 | Not Available | + | 2923247 - 2923744 | 18916.7 |
| predicted abc-type atpase | SAMN02910353_02537 | Not Available | + | 2923719 - 2924345 | 23741.2 |
| hypothetical protein | SAMN02910353_02538 | Not Available | + | 2924391 - 2925566 | 46193.9 |
| rna-splicing ligase rtcb, repairs trna damage | SAMN02910353_02539 | Not Available | + | 2925852 - 2927054 | 44852.2 |
| hypothetical protein | SAMN02910353_02540 | Not Available | + | 2927054 - 2927221 | 6639.05 |
| hypothetical protein | SAMN02910353_02541 | Not Available | - | 2927312 - 2927452 | 5133.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.