Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN02910353_02522 | Not Available | - | 2907810 - 2908301 | 18210.9 |
| catechol 2,3-dioxygenase | SAMN02910353_02523 | Not Available | - | 2908303 - 2908665 | 14447.5 |
| acetyltransferase (gnat) domain-containing protein | SAMN02910353_02524 | Not Available | - | 2908709 - 2909179 | 18254.8 |
| protein of unknown function | SAMN02910353_02525 | Not Available | - | 2909234 - 2909641 | 16291.6 |
| aminoglycoside 6-adenylyltransferase | SAMN02910353_02526 | Not Available | - | 2909644 - 2910492 | 32586.9 |
| type i restriction enzyme m protein | SAMN02910353_02527 | Not Available | - | 2910961 - 2912613 | 62096.0 |
| recb family exonuclease | SAMN02910353_02528 | Not Available | + | 2912864 - 2915380 | 93009.8 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN02910353_02529 | Not Available | + | 2915373 - 2918633 | 122740.0 |
| adenine-specific dna-methyltransferase | SAMN02910353_02530 | Not Available | + | 2918870 - 2919277 | 14986.1 |
| hypothetical protein | SAMN02910353_02531 | Not Available | + | 2919279 - 2919608 | 12655.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.