Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 2889069 - 2889144 | Not Available |
| site-specific recombinase xerd | SAMN02910353_02503 | Not Available | - | 2889335 - 2890792 | 56450.7 |
| dna binding domain-containing protein, excisionase family | SAMN02910353_02504 | Not Available | - | 2890848 - 2891072 | 8453.36 |
| hypothetical protein | SAMN02910353_02505 | Not Available | - | 2891149 - 2891466 | 12423.0 |
| aaa-like domain-containing protein | SAMN02910353_02506 | Not Available | - | 2891562 - 2892900 | 49572.5 |
| hypothetical protein | SAMN02910353_02507 | Not Available | + | 2892901 - 2893305 | 15930.7 |
| hypothetical protein | SAMN02910353_02508 | Not Available | + | 2893315 - 2893599 | 10376.2 |
| hypothetical protein | SAMN02910353_02509 | Not Available | + | 2894080 - 2894466 | 14719.4 |
| hypothetical protein | SAMN02910353_02510 | Not Available | + | 2894639 - 2897965 | 128879.0 |
| hypothetical protein | SAMN02910353_02511 | Not Available | + | 2898726 - 2899007 | 11057.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.