Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphate aldolase, class ii | SAMN02910353_02482 | Not Available | - | 2865427 - 2866290 | 30483.7 |
| hypothetical protein | SAMN02910353_02483 | Not Available | + | 2866576 - 2867601 | 36002.5 |
| hypothetical protein | SAMN02910353_02484 | Not Available | + | 2867629 - 2868318 | 25639.2 |
| hypothetical protein | SAMN02910353_02485 | Not Available | + | 2868325 - 2869038 | 26907.3 |
| hypothetical protein | SAMN02910353_02486 | Not Available | - | 2869175 - 2870068 | 32499.8 |
| hypothetical protein | SAMN02910353_02487 | Not Available | - | 2870068 - 2870886 | 30181.1 |
| pyruvate kinase | SAMN02910353_02488 | Not Available | - | 2870889 - 2872313 | 51733.2 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN02910353_02489 | Not Available | - | 2872334 - 2874688 | 88794.1 |
| starch synthase | SAMN02910353_02490 | Not Available | + | 2875176 - 2876630 | 55994.8 |
| multimeric flavodoxin wrba | SAMN02910353_02491 | Not Available | + | 2876755 - 2877372 | 22239.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.